Expression and Purification of SARS CoV-2 RBD Protein in the Prokaryotic Expression System to Evaluate the IgG Antibody in the Serums of COVID-19 Recovered Cases

Document Type : Original Article

Authors

1 Department of Virology, Faculty of Medical Sciences, Tarbiat Modares University, Tehran, Iran

2 Department of Influenza and Respiratory Diseases, Pasteur Institute, Tehran, Iran

3 Hepatitis and AIDS Department, Pasteur Institute, Tehran, Iran

10.61186/jsmj.2022.341969.2843

Abstract

Background and Objectives One of the most important proteins of the SARS-COV-
2 virus is S protein, which consists of S1 and S2 subunits. The most important region in
subunit S1 is the receptor binding region (RBD), which plays a key role in binding to
ACE receptors. The RBD is a conserved region in S protein that is the target of the
immune system and the production of antibodies against the virus. Due to the
importance of this region in the production of neutralizing antibodies, it can be a good
candidate for vaccine development and production of diagnostic kits. Therefore, the
present study aimed to assess the response rate of antibodies in the serum of
recovered COVID-19 cases using recombinant RBD protein produced in the prokaryotic
expression system as an inexpensive expression system.
Subjects and Methods In this study, the recombinant PET22b-RBD construct was
transformed to the Escherichia coli (BL21) host, and the bacterial cells were cultured
in a culture medium; thereafter, protein expression was induced using isopropyl beta-
D-thiogalactoside (IPTG). The expression of recombinant RBD protein was confirmed
by acrylamide gel (SDS-PAGE) and Western blotting. Finally, the desired protein was
extracted using a Ni-NTA column and applied in an indirect ELISA.
Results In comparison with the serum of healthy individuals (cut off: 0.412), no
significant increase was observed in the response of 30 serum samples to the
recombinant RBD protein.
Conclusion The recombinant RBD protein produced in the prokaryotic host did not
respond significantly to the antibodies in the serum of recovered COVID-19 patients
and cannot be used for diagnostic purposes.

Keywords

Main Subjects


[1] Zhu N, Zhang D, Wang W, Li X, Yang B, Song J, Zhao X, Huang B, Shi W, Lu R, Niu P. A novel coronavirus from patients with pneumonia in China, 2019. New England journal of medicine. 2020; 382(8):727-33. [DOI:10.1056/NEJMoa2001017] [PMID] [PMCID]
[2] Parasher A. COVID-19: Current understanding of its pathophysiology, clinical presentation and treatment. Postgraduate medical journal. 2021; 97(1147):312-20.
[DOI:10.1136/postgradmedj-2020-138577] [PMID] [PMCID]
[3] Alimolaie A. [A review of coronavirus disease-2019 (COVID-19)(Persian)]. Iranian Journal of Biology. 2020; 3(6):152-7. [Link]
[4] Fahmi I. World Health Organization coronavirus disease 2019 (Covid-19) situation report. DroneEmprit. 2019. [Link] [5] Lan J, Ge J, Yu J, Shan S, Zhou H, Fan S, S, Zhang Q, Shi X, Wang Q, Zhang L, Wang X. Structure of the SARS-CoV-2 spike receptor-binding domain bound to the ACE2 receptor. Nature. 2020; 581(7807):215-20. [DOI:10.1038/s41586-020-2180-5] [PMID]
[6] Kakodkar P, Kaka N, Baig M. A comprehensive literature review on the clinical presentation, and management of the pandemic coronavirus disease 2019 (COVID-19). Cureus. 2020; 12(4):e7560. [DOI:10.7759/cureus.7560] [PMID] [PMCID]
[7] Fung TS, Liu DX. Post-translational modifications of coronavirus proteins: roles and function. Future virology. 2018; 13(6):430-05. [DOI:10.2217/fvl-2018-0008] [PMID]
[8] Watanabe Y, Allen JD, Wrapp D, McLellan JS, Crispin M. Site-specific glycan analysis of the SARS-CoV-2 spike. Science. 2020; 369 (6501):330-3. [DOI:10.1126/science.abb9983] [PMID] [PMCID] [9] Chen W, Hui Z, Ren X, Luo Y, Shu J, Yu H, Li Z. The N-glycosylation sites and Glycan-binding ability of S-protein in SARS-CoV-2 Coronavirus. bioRxiv. 2020. [DOI:10.1101/2020.12.01.406025]
[10] Shin Y-J, König-Beihammer J, Vavra U, Schwestka J, Kienzl NF, Klausberger M, Laurent E, Grünwald-Gruber C, Vierlinger K, Hofner M, Margolin E. N-glycosylation of the SARS-CoV-2 receptor binding domain is important for functional expression in plants. Frontiers in Plant Science. 2021; 12: 689104.
[DOI:10.3389/fpls.2021.689104] [PMID]
[11] Almehdi AM, Khoder G, Alchakee AS, Alsayyid AT, Sarg NH, Soliman SS. SARS-CoV-2 spike protein: Pathogenesis, vaccines, and potential therapies. Infection. 2021; 49(5):855-76. [DOI: 10.1007/s15010-021-01677-8] [PMID] [PMCID]
[12] Prahlad J, Struble LR, Lutz WE, Wallin SA, Khurana S, Schnaubelt A, et al. Bacterial expression and purification of functional recombinant SARS-CoV-2 spike receptor binding domain. bioRxiv. 2021: 2021-02. [DOI:10.1101/2021.02.03. 429601]
[13] Merkuleva IA, Shcherbakov DN, Borgoyakova MB, Shanshin DV, Rudometov AP, Karpenko LI, Belenkaya SV, Isaeva AA, Nesmeyanova VS, Kazachinskaia EI, Volosnikova EA. Comparative Immunogenicity of the Recombinant Receptor-Binding Domain of Protein S SARS-CoV-2 Obtained in Prokaryotic and Mammalian Expression Systems. Vaccines. 2022; 10(1):96.
[DOI:10.3390/vaccines10010096] [PMID] [PMCID]
[14] Verissimo CDM, O'brien C, Corrales JL, Dorey A, Cwiklinski K, Lalor R, Doyle JM, Field S, Masterson C, Martinez ER, Hughes G. Improved diagnosis of SARS-CoV-2 by using nucleoprotein and spike protein fragment 2 in quantitative dual ELISA tests. Epidemiology & Infection. 2021; 149: e140. [DOI:10.1017/S09 50268821001308] [PMID] [PMCID]
[15] Verissimo CDM, Lopez-Corrales J, Dorey AL, Cwiklinski K, Lalor R, Calvani NED, Jewhurst HL, Flaus A, Doyle S, Dalton JP. Production of a functionally active recombinant SARS-CoV-2 (COVID-19) 3C-Like protease and a soluble inactive 3C-like protease-RBD chimeric in a prokaryotic expression system. Epidemiology & Infection. 2022; 150:e128. [DOI:10.1017/S0950268822001078] [PMID] [PMCID]